Fit pseudo-outcome regression conditioning on treatment and baseline
Source:R/fit_mechanisms.R
fit_nuisance_v.RdFit pseudo-outcome regression conditioning on treatment and baseline
Arguments
- train_data
A
data.tablecontaining observed data, with columns in the order specified by the NPSEM (Y, M, R, Z, A, W), with column names set appropriately based on the input data. Such a structure is a convenience utility to passing data around to the various core estimation routines and is automatically generated bymedoutcon.- valid_data
A holdout data set, with columns exactly matching those appearing in the preceding argument
data, to be used for estimation via cross-fitting. Not optional for this nuisance parameter.- contrast
A
numericdouble indicating the two values of the interventionAto be compared. The default value ofc(0, 1)assumes a binary intervention nodeA.- learners
Stack, or other learner class (inheriting fromLrnr_base), containing a set of learners from sl3, to be used in fitting a model for this nuisance parameter.- b_out
Output from the internal function for fitting the outcome regression
fit_out_mech.- q_out
Output from the internal function for fitting the mechanism of the intermediate confounder while conditioning on the mediators, i.e.,
fit_moc_mech, settingtype = "q".- m_names
A
charactervector of the names of the columns that correspond to mediators (M). The input for this argument is automatically generated by a call to the wrapper functionmedoutcon.- w_names
A
charactervector of the names of the columns that correspond to baseline covariates (W). The input for this argument is automatically generated bymedoutcon.